PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04086

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 392aa MW: 42662.9 Da PI: 6.0947

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04086	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.6e-17	40	85	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+q+G ++W+ Iar ++ gR++k+c++rw + OIW04086 40 KGPWSPEEDAVLSRLVAQFGARNWTMIARGVP-GRSGKSCRLRWCNQ 85 79****************************.*********985 PP
2	Myb_DNA-binding	57.7	2.7e-18	92	136	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd l++ a++ +G++ W++Iar ++ gRt++ +k++w++ OIW04086 92 RKPFTEEEDSLILSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 136 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MTEEDRTYAV PTAPNGVAAA AEFEHDGGDD VDMKVAGKVK GPWSPEEDAV LSRLVAQFGA 60 RNWTMIARGV PGRSGKSCRL RWCNQLDPCV KRKPFTEEED SLILSAHAIH GNKWAAIARL 120 LPGRTDNAIK NHWNSTLKRR HVELGTHVRK HADVMADGSF EKTKASSEET MSVGDINSLN 180 PPEVRNVYMD NEIKHNEDNP PKRDGAEVEG HPTLYRPASR ISAFSFYNPP GRPATGPCSK 240 MFPLQSPLIQ GVGACKLFDG TGCEPMVPSQ CGHGCCEVDL RGSNSQGSLL GPEFVDYLES 300 PSFTSHELIS VVTDLNNIAW IKSGLESYGA GRVTGNTATQ GAATSSETGF LGQGLKNDYM 360 QYEEGPDKFL GGMQEVLSTK MPRQHFAMPA EV

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MTEEDRTYAV PTAPNGVAAA AEFEHDGGDD VDMKVAGKVK GPWSPEEDAV LSRLVAQFGA  60
RNWTMIARGV PGRSGKSCRL RWCNQLDPCV KRKPFTEEED SLILSAHAIH GNKWAAIARL  120
LPGRTDNAIK NHWNSTLKRR HVELGTHVRK HADVMADGSF EKTKASSEET MSVGDINSLN  180
PPEVRNVYMD NEIKHNEDNP PKRDGAEVEG HPTLYRPASR ISAFSFYNPP GRPATGPCSK  240
MFPLQSPLIQ GVGACKLFDG TGCEPMVPSQ CGHGCCEVDL RGSNSQGSLL GPEFVDYLES  300
PSFTSHELIS VVTDLNNIAW IKSGLESYGA GRVTGNTATQ GAATSSETGF LGQGLKNDYM  360
QYEEGPDKFL GGMQEVLSTK MPRQHFAMPA EV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-100	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW04086