PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW04068 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 223aa MW: 24905.6 Da PI: 5.4214 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 114.4 | 7.2e-36 | 7 | 106 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +C aCk+lrrkC++dCv++p+f ++ + +f +vhk++Gasnv++ll++lp + r+da+ ++ y+A ar++dP+yG+v++i +lqqq+++l++e++ l + OIW04068 7 SCGACKFLRRKCTSDCVFSPHFSYDEaTTHFSAVHKVYGASNVSRLLSHLPIQFRSDAAITISYQAMARMQDPIYGCVAHIYALQQQVANLQEEINILAS 106 6**********************98868*******************************************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MTGFGSSCGA CKFLRRKCTS DCVFSPHFSY DEATTHFSAV HKVYGASNVS RLLSHLPIQF 60 RSDAAITISY QAMARMQDPI YGCVAHIYAL QQQVANLQEE INILASNLTM ENSTVGVLNC 120 GSDQTPVNSN NEIHYILQND ANREQYYQNQ LSNLLSNHEG SSATSYHQSF DSMMNIELSN 180 AHGLEDSSLF GDSNSNPLEK FLSGIDQEVF MNHPWFKHNA EMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 7e-53 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW04068 |