PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04029

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 374aa MW: 42598.3 Da PI: 7.7115

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04029	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.4	1.8e-13	49	105	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e+Aa+a++ a++k++g OIW04029 49 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEMAARAYDLAALKYWG 105 57*****************99998898888888******************98 PP
2	AP2	51.1	3.2e-16	148	199	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OIW04029 148 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 199 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MARKSNHKNI TTTPCSNSNT TTLTPTNVKK KKKRARKSIP RDPPSQRSSI YRGVTRHRWT 60 GRYEAHLWDK NCWNESQNKK GRQGAYDDEE MAARAYDLAA LKYWGQDTIL NFPLSKYEDE 120 LKEMEDQSKE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY 180 ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPKAQ DQEEDIININ ESISCPITPN 240 TELDQPNPIH VPIPIPIPIP IHGDELEDVG FVSHHQRSSV SHGSTKSYNS ALGLLLQSSK 300 FKEMTSSSSA SDYNNTNPSP LESNSNIPRR TFPEDIQTFF ESHQEDLGSY INESDDVIFG 360 ELSSIAAPIF HCEL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MARKSNHKNI TTTPCSNSNT TTLTPTNVKK KKKRARKSIP RDPPSQRSSI YRGVTRHRWT  60
GRYEAHLWDK NCWNESQNKK GRQGAYDDEE MAARAYDLAA LKYWGQDTIL NFPLSKYEDE  120
LKEMEDQSKE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY  180
ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPKAQ DQEEDIININ ESISCPITPN  240
TELDQPNPIH VPIPIPIPIP IHGDELEDVG FVSHHQRSSV SHGSTKSYNS ALGLLLQSSK  300
FKEMTSSSSA SDYNNTNPSP LESNSNIPRR TFPEDIQTFF ESHQEDLGSY INESDDVIFG  360
ELSSIAAPIF HCEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	37	KKKKKRARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-86	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW04029