PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW04000 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 27008.4 Da PI: 4.1664 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.6e-16 | 29 | 78 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr p++ r r++lg+++t +Aa+a +aa l+g OIW04000 29 LYRGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDTQLKAARAFDAALYILRG 78 59****999.**********933...5*********************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MAGTHDSSSS MQNQSCNNDL ACSNNISKLY RGVRKRKWGK WVSEIRLPNS RDRIWLGSYD 60 TQLKAARAFD AALYILRGTN ACFNFPDTPL NMNINNVVVP RGRSLSPQEI QEVAAKFANY 120 THTQLETQEE EEEEEEPLES QSGVDSFGLF ESKTTSSGSG YDNYDGKMDW TFLNMLDDDS 180 NAVAGFDCRP DYCELDKTYS SGELLYYTQP PPLEDNNGDE TEGNDAFYNH SILWSWDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 5e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW04000 |