PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW03981
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 366aa    MW: 40742.7 Da    PI: 6.7747
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW03981genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.71.8e-07134154526
               --SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                C++f++ G Ck Gd C +aHg
  OIW03981 134 ACPDFRK-GNCKKGDACEYAHG 154
               7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MMLGEHHRSN PTIHVPPWQD PTEDMYSPYL YNGVTDGNAN AGDYSPYYMQ EALTALQRYL  60
PSNEEDGDSE SEILGRESDA PVDAYSCDQF RIYEFKIRKC SRGRSHDWTE CPYAHPGEKA  120
RRRDPRKFHY SGTACPDFRK GNCKKGDACE YAHGVFECWL HPARYRTQPC KDGTSCRRRV  180
CFFAHTPEQL RIVPNHSPRS VDSYDGSPVI NGTMAFLSSP VSISPPVSSP VESPPMSPME  240
RSSISEMMAS LRNLQLGKLK SMPCNRTVIP LGLGSPGFGS PRGSVLRPGF ISLPSTPTQV  300
PGRGGVSHFD LWDQSCEEEP VMERVESGRG IRAKMFEKLS KENSLDGSGH VSGGAPDVEW  360
VSKLID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-125C3H family protein