PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW03973
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 650aa    MW: 73455.4 Da    PI: 5.2082
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW03973genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.97.3e-1102826473373
      GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
               +lL++cA+av+s d+++a++lL+++++++sp gd +qRl +yf+ +L++rla  ++  y     ++ +  + ++ l+a+kl ++v+P+ ++s+l++ + I+
  OIW03973 282 TLLTQCAQAVASYDQRNANELLNQIRQHSSPFGDGLQRLSHYFAIGLETRLAA-GTPSY-----TPFDMVTAADMLKAYKLQVQVFPLQRMSNLLTTRKIV 376
               69**************************************************9.44444.....3444444779*************************** PP

      GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEal 202
               + v++e ++HiiDf+is+G+QWp+L++ L++R++g+p++R+Tg++ p++g   +e+l+etg+rL++++++ +vpfe+n  +a+++e+++le+L++++ E++
  OIW03973 377 DLVKNEGTLHIIDFGISYGFQWPCLIKHLSQRRGGSPKVRMTGIDFPQPGfrPAERLQETGQRLENYCKRHNVPFEYNC-IAQKWETIRLEDLKIDKTEVT 476
               *************************************************9*****************************.7******************** PP

      GRAS 203 aVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacega 303
               +Vn+ +++++l+de+vs++s+rd++Lkl+++++P+++++   +  ++++ Fl+rf e+l ++s+lfd++ea++ re+ er+ +E+ l+gr++ nv+acega
  OIW03973 477 VVNCLYRMKNLPDETVSVNSARDALLKLFRKINPNIFIHGVVNGTYSAPFFLTRFRETLFHFSSLFDMFEANVDREDTERVILEKGLFGRDAINVIACEGA 577
               ***************************************************************************************************** PP

      GRAS 304 errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
               er+er et+++W+ r  +aGFk+++l+ + +++ak +++  + + + v+e+ ++++lgWk+r L +vSaW
  OIW03973 578 ERVERPETYKQWQVRNLRAGFKQLRLDPELVNEAKEMVKSEYHKDFVVDENGKWVLLGWKGRILNAVSAW 647
               ****************************************99888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    
MFSANSLLEN IPAQLKEFLV EEDSTSPSSV TSSVEEYTKY SNPILRYIND ILMGEEDNLE  60
NKPCMLQECL RLQAAEKSFY DVLGHNYPSS HNQIRGFFND DDDGNNGCSV SFESNSTSYI  120
TDNSYESERI NTADEFESYL LDNPLVDTSE NTNDVDVAPD PSQAAKRNAI RPQNKAVLIG  180
ENAVQRVKRS HQVDGNSHEE NERGSKISAV FSDNSEPLEL LDEVLRVQIG GRHSCTAGET  240
SSENETFKPN VVDSGGGSIG KAATRSKKGT NTETTTGVDL WTLLTQCAQA VASYDQRNAN  300
ELLNQIRQHS SPFGDGLQRL SHYFAIGLET RLAAGTPSYT PFDMVTAADM LKAYKLQVQV  360
FPLQRMSNLL TTRKIVDLVK NEGTLHIIDF GISYGFQWPC LIKHLSQRRG GSPKVRMTGI  420
DFPQPGFRPA ERLQETGQRL ENYCKRHNVP FEYNCIAQKW ETIRLEDLKI DKTEVTVVNC  480
LYRMKNLPDE TVSVNSARDA LLKLFRKINP NIFIHGVVNG TYSAPFFLTR FRETLFHFSS  540
LFDMFEANVD REDTERVILE KGLFGRDAIN VIACEGAERV ERPETYKQWQ VRNLRAGFKQ  600
LRLDPELVNE AKEMVKSEYH KDFVVDENGK WVLLGWKGRI LNAVSAWIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-166GRAS family protein