PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW03939 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 203aa MW: 22480.6 Da PI: 6.0863 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 134.5 | 4.2e-42 | 37 | 136 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca++C+lapyfp ++p+kf ++h++FGasn++k+l++lpe +r da+ss+vyeA ar+rdPvyG++g+i +lq+q+++l+a+la++++e OIW03939 37 PCAACKILRRRCAEKCILAPYFPPTEPSKFTIAHRVFGASNIIKFLQELPEFQRADAVSSMVYEAGARIRDPVYGCAGTICNLQKQVSELQAQLAKTQAE 136 7**********************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MDCSVTNTTN NSSPSLSHSS SFSPPQQGLV PQIVMSPCAA CKILRRRCAE KCILAPYFPP 60 TEPSKFTIAH RVFGASNIIK FLQELPEFQR ADAVSSMVYE AGARIRDPVY GCAGTICNLQ 120 KQVSELQAQL AKTQAEVVNM QLQQANLVAL ICMEMAPQEP SPQQSLDNFI SSPHHNNIFG 180 YQNNLNFYDE NISLNSLLEP LWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 9e-76 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW03939 |