PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03906

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 415aa MW: 45688.9 Da PI: 5.9411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03906	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.5e-11	125	169	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRR ++++++ Lr+l+P+ +K++Ka+i AveY++ Lq OIW03906 125 LITERRRRGQMKEKLYSLRSLVPNI-----TKMDKASIIGDAVEYVHRLQ 169 578*******************7.....7***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MDPMNLQQNN VVHVNDFINL IRGENEDPIY NFGSDLLNDC FIDKQFVSLA GNSIFDQNNN 60 VVNAYDPNST LSSFSYFGGK VKGEGEGEDE NDGIYSSSKT TTTTIIAGES TKAKSRMKTD 120 RSKTLITERR RRGQMKEKLY SLRSLVPNIT KMDKASIIGD AVEYVHRLQA QANKLKAEIA 180 GLETSTLVYE SYQGSSSIID DPLNILVTNN SHPISKMIMQ IKMYQVEEKG YHGKIACNKG 240 QGVAASLYKA LESLAGFKVQ NSNLVTVCDS LILTFTLNAE IAGLETSTLV YESYQGSSSI 300 IDDPLNILVT NNSHPISKMI MQIKMYQVEE KGYHGKIACN KGQGVAASLY KALESLAGFK 360 VQNSNLVTVC DSLILTFTLN VKGCDPEINL PNLKLWVTGA LLNQGFEFMA FAHDA

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MDPMNLQQNN VVHVNDFINL IRGENEDPIY NFGSDLLNDC FIDKQFVSLA GNSIFDQNNN  60
VVNAYDPNST LSSFSYFGGK VKGEGEGEDE NDGIYSSSKT TTTTIIAGES TKAKSRMKTD  120
RSKTLITERR RRGQMKEKLY SLRSLVPNIT KMDKASIIGD AVEYVHRLQA QANKLKAEIA  180
GLETSTLVYE SYQGSSSIID DPLNILVTNN SHPISKMIMQ IKMYQVEEKG YHGKIACNKG  240
QGVAASLYKA LESLAGFKVQ NSNLVTVCDS LILTFTLNAE IAGLETSTLV YESYQGSSSI  300
IDDPLNILVT NNSHPISKMI MQIKMYQVEE KGYHGKIACN KGQGVAASLY KALESLAGFK  360
VQNSNLVTVC DSLILTFTLN VKGCDPEINL PNLKLWVTGA LLNQGFEFMA FAHDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28160.1	3e-60	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW03906