PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03728

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 672aa MW: 73379.1 Da PI: 5.1979

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03728	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	26.3	1.9e-08	241	281	12	55
AP2 12 rgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +g+W A + k +lg+f t+e+Aa+a++ a+ k++g OIW03728 241 KGKWQAKMGRV-----GggKDLYLGTFSTEEDAARAYDIAAIKFKG 281 69***6664.....224*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MDDSNNWLSS IPFSPIHPSL PLQFQESQSH NPFSLGTSVD ENMESLFQNY DWTQVNSPSN 60 NEIPKVAEVL DVRSTENESD LMPMQNSVVA ANSSNHECQE NNANNNMQSL TSSMENGGNK 120 DSTNETNGDN STRNNVEATH KRTSHNSGQR KPIFRGIGNY EKELEEMKNT TTKDYVATIK 180 RKSSGFSRGA SIYRGVTRPK ILSVNEAAEP DLVHDRVCLA EAAELELLVH DRSPWPMHYQ 240 KGKWQAKMGR VGGGKDLYLG TFSTEEDAAR AYDIAAIKFK GPNAMTNFDI SHYDVKAITE 300 SRTLPIKGGV SKRLHEHMNI RSSSSVMDNN HGDSNNWNYN GSDFIGNYNG LIEMTSNSSS 360 SLIDNNCGHS NHRNYNGAGF IGNNNGLVEM TSNYSSSLVD NNGGNFNHWN YNGAGFIGNN 420 NDLVEMTSNY SSSLMDNNGG DSNHWSYNGA GFIGNHNVLV ETTSNSSSSL IDNHGGHSNH 480 WKYNGAGFIG NNNGLVEMTS NSSSSLIDNN GGNHWNYNGA GLIRNNNGLF DMTSNSYSSL 540 VDNNGGHSNH WNYNGAGFIR NNNGLFDMTS NSYSSLVDNN GGHSNHWNYN GAGLIGNNNG 600 LVEMTSNSFS PLIDNNGGSG SDNGLSGMAL NPSLNDEAEL SHMVDHDIAT KGYSGWLMDS 660 INASNVDFTK LQ

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MDDSNNWLSS IPFSPIHPSL PLQFQESQSH NPFSLGTSVD ENMESLFQNY DWTQVNSPSN  60
NEIPKVAEVL DVRSTENESD LMPMQNSVVA ANSSNHECQE NNANNNMQSL TSSMENGGNK  120
DSTNETNGDN STRNNVEATH KRTSHNSGQR KPIFRGIGNY EKELEEMKNT TTKDYVATIK  180
RKSSGFSRGA SIYRGVTRPK ILSVNEAAEP DLVHDRVCLA EAAELELLVH DRSPWPMHYQ  240
KGKWQAKMGR VGGGKDLYLG TFSTEEDAAR AYDIAAIKFK GPNAMTNFDI SHYDVKAITE  300
SRTLPIKGGV SKRLHEHMNI RSSSSVMDNN HGDSNNWNYN GSDFIGNYNG LIEMTSNSSS  360
SLIDNNCGHS NHRNYNGAGF IGNNNGLVEM TSNYSSSLVD NNGGNFNHWN YNGAGFIGNN  420
NDLVEMTSNY SSSLMDNNGG DSNHWSYNGA GFIGNHNVLV ETTSNSSSSL IDNHGGHSNH  480
WKYNGAGFIG NNNGLVEMTS NSSSSLIDNN GGNHWNYNGA GLIRNNNGLF DMTSNSYSSL  540
VDNNGGHSNH WNYNGAGFIR NNNGLFDMTS NSYSSLVDNN GGHSNHWNYN GAGLIGNNNG  600
LVEMTSNSFS PLIDNNGGSG SDNGLSGMAL NPSLNDEAEL SHMVDHDIAT KGYSGWLMDS  660
INASNVDFTK LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	2e-60	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW03728