PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03413

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 277aa MW: 31270 Da PI: 8.9989

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03413	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.4e-19	124	178	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ ++tkeq ++Le+ Fe++++++ ++++e+A+kl+L rqV vWFqNrRa+ k OIW03413 124 KKKLRLTKEQSTVLEKNFEEHSTLNPKQKQEIARKLNLRARQVEVWFQNRRARIK 178 78889************************************************87 PP
2	HD-ZIP_I/II	113.4	1.5e-36	124	214	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+++LE++Fee+++L+p++K+e+ar+L+l++rqv+vWFqnrRAR+k+kq+E+d+e+L + +++l+een+rL+ke eeL++ l OIW03413 124 KKKLRLTKEQSTVLEKNFEEHSTLNPKQKQEIARKLNLRARQVEVWFQNRRARIKLKQTESDFESLSKYCKTLREENKRLQKELEELKSML 214 59*************************************************************************************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MGFNDISNTG LQFGLGLSLG LHDHHNQRDQ IQKKREDDPS KFNKAYYLSL TLGPSSDDHG 60 NETNNQPGSK IEASSRSTVS SSLISNSSSI TRVRDHCLGQ EFEVEVEKVP SKVRNFDGED 120 ITPKKKLRLT KEQSTVLEKN FEEHSTLNPK QKQEIARKLN LRARQVEVWF QNRRARIKLK 180 QTESDFESLS KYCKTLREEN KRLQKELEEL KSMLTSPGPF HAQIPATTLT KCPSCERICG 240 GESNGSSPPT TLLIGSKAHN HFYTDKYPFS HSSSASC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	181	RRARIKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-51	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW03413