PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03261

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 358aa MW: 40096.3 Da PI: 9.454

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03261	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	87	131	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ OIW03261 87 RGHWRPNEDSKLKELVAQYGPQNWNLIAEHLQ-GRSGKSCRLRWFN 131 899***************************.*********98 PP
2	Myb_DNA-binding	49.3	1.1e-15	139	182	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++ eE e+l+ a+k +G++ W+ Iar ++ gRt++ +k++w+ OIW03261 139 RRAFSDEEGERLLTAHKIYGNK-WAIIARLFP-GRTDNAVKNHWHV 182 6789****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MKSQHLNHGD SGFNEDMKIF PSPLPFQVLS PLMLQPQESK GTKKTDDEGN GYFGVEIKNL 60 SLKLGEEVEE AKRSGAGKNG HVKLCVRGHW RPNEDSKLKE LVAQYGPQNW NLIAEHLQGR 120 SGKSCRLRWF NQIDPRINRR AFSDEEGERL LTAHKIYGNK WAIIARLFPG RTDNAVKNHW 180 HVIMARRQRD NSSWCKRRKP TSDQSLPKAL KLNLPKNNAA SESTMSSTID ISASTCTNLS 240 LTPSSTKLSP SIFSKLNPVQ HHTGHASLIG LSREREISTG DVGFNKFFGD WNETCEPRDM 300 GKLMVLDQSN FSDSNSEVSL SESVATNMFN LSISRESENV GHKISMPFID FLGVGAKC

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MKSQHLNHGD SGFNEDMKIF PSPLPFQVLS PLMLQPQESK GTKKTDDEGN GYFGVEIKNL  60
SLKLGEEVEE AKRSGAGKNG HVKLCVRGHW RPNEDSKLKE LVAQYGPQNW NLIAEHLQGR  120
SGKSCRLRWF NQIDPRINRR AFSDEEGERL LTAHKIYGNK WAIIARLFPG RTDNAVKNHW  180
HVIMARRQRD NSSWCKRRKP TSDQSLPKAL KLNLPKNNAA SESTMSSTID ISASTCTNLS  240
LTPSSTKLSP SIFSKLNPVQ HHTGHASLIG LSREREISTG DVGFNKFFGD WNETCEPRDM  300
GKLMVLDQSN FSDSNSEVSL SESVATNMFN LSISRESENV GHKISMPFID FLGVGAKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-65	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW03261