PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW03200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 27282.9 Da PI: 8.0131 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.8e-11 | 70 | 116 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr+ll + K +Ka+ L k+v+ +k+L OIW03200 70 KNHKEAEKRRRERINSHLNQLRTLLHCN-----SKTDKASLLAKVVKRVKEL 116 58***********************997.....7*************99998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MQQQQQIGME NSELFKLLAG TNSSFFHSTT TMHQSLCSSS SNDYNNHPLE LSEITDALSQ 60 QQDRALAALK NHKEAEKRRR ERINSHLNQL RTLLHCNSKT DKASLLAKVV KRVKELKKQT 120 SDITELETLP SETDEITILS ISDEDYSDLV GDGRLIFKAS LCCEDRSDLI PDIIEILNSL 180 HLKTLKAEMV TLGGRTRNIL VVAADKYHSI ESIPFLQNSF KSLLERSNSS DRSKRRRRLN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 234 | 239 | KRRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G41130.1 | 8e-76 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW03200 |