PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW03047

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 995aa MW: 109820 Da PI: 5.5851

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW03047	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2.1e-13	2	41	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d++l +av+ql g++Wk+Ia+++ Rt+ qc +rwqk+l OIW03047 2 QDDILRKAVQQLKGKNWKKIAECFK-DRTDVQCLHRWQKVL 41 5899******************9.**********986 PP
2	Myb_DNA-binding	63.8	3.3e-20	47	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++v+++G++ W+tIa++++ gR +kqc++rw+++l OIW03047 47 KGPWSKEEDEVIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 93 79****************************.***********97 PP
3	Myb_DNA-binding	47.4	4.3e-15	99	141	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ OIW03047 99 KEAWTQEEELALIHAHQIYGNK-WAELTKFLP-GRTDNAIKNHWH 141 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 995 aa Download sequence
MQDDILRKAV QQLKGKNWKK IAECFKDRTD VQCLHRWQKV LNPELIKGPW SKEEDEVIIE 60 LVNKYGPKKW STIAQHLPGR IGKQCRERWH NHLNPAINKE AWTQEEELAL IHAHQIYGNK 120 WAELTKFLPG RTDNAIKNHW HSSVKKKLDS YFASGLLNQF QSVLHVGNSN QSMVLASSSL 180 QCGDDNGSKQ TEGEEVPECS ESANAGHFPL AIEMSDAGLQ TREDYRRNED CSHGKDHGSC 240 QACCSDNVRQ DTHTSQFIDR KFSLEVGNPI SEDCQINFHS FTNISSEGLM QESSQLQRDC 300 NAPHEICDYN PFQTSVSLGV STSTGHTSTD SVRPELISDD TCGRVFFSEA ANDACFCSGD 360 NKGVDFVNFS GYTSFLCQSC DIRMPETSGT STSQQSCPPC FCTFNTSSSQ SVPPVLSASG 420 HCLVYTARAD QLFGPEDQQI VSGAPDNFVY ANDMSSSPRV YDIDKEVMQE SPDIVKDTSK 480 LVPVKSFGFA SDSMQTCYPT DENPTARIKK EDAGALCYEP PRFPSLDIPF FSCDLVQSGA 540 DMQQEFSPFG IRQFMMSSMN CLTPFRLWNS PSRDDSPDAL LKSAAKTFTG TPSILKKRRR 600 SLLSPLSNKR ISKKLETDMT ATLTKTFPSF EGIFNGNETS EAVLLSPTAL QNRNSSVSVD 660 DGKENYGPAF KGERVEEKMK SAILDKMKSE NDTVGCNSQN EIKKRPLDID AKMKIVVGAA 720 TVAEIVHQPS GVLVEHDIND RLLYSPDQAG FKSDIVLDSS ARTPKKLDNN SSEKAPNQSI 780 PLKLSSENPC SNVDSPCVRA KEHDRLSVAV TCVQSVCSSA PGENSGDQTR NDGPFETSNI 840 FGSTPFRKSL ESPSAWKSPW LFNTFLSSPR FATEITIEDF GYFISPGDRS YDAIGLMKQV 900 SEQTAATYAN AQEILGNETP KALKKDATGN KDGNHENNDP RKQAGNNSQL AINSLMERRV 960 LDFSECGTPG KGDNSKSSSA LSFSGPTSYL LKGCR

Sequence ? help Back to Top

Protein Sequence Length: 995 aa Download sequence

MQDDILRKAV QQLKGKNWKK IAECFKDRTD VQCLHRWQKV LNPELIKGPW SKEEDEVIIE  60
LVNKYGPKKW STIAQHLPGR IGKQCRERWH NHLNPAINKE AWTQEEELAL IHAHQIYGNK  120
WAELTKFLPG RTDNAIKNHW HSSVKKKLDS YFASGLLNQF QSVLHVGNSN QSMVLASSSL  180
QCGDDNGSKQ TEGEEVPECS ESANAGHFPL AIEMSDAGLQ TREDYRRNED CSHGKDHGSC  240
QACCSDNVRQ DTHTSQFIDR KFSLEVGNPI SEDCQINFHS FTNISSEGLM QESSQLQRDC  300
NAPHEICDYN PFQTSVSLGV STSTGHTSTD SVRPELISDD TCGRVFFSEA ANDACFCSGD  360
NKGVDFVNFS GYTSFLCQSC DIRMPETSGT STSQQSCPPC FCTFNTSSSQ SVPPVLSASG  420
HCLVYTARAD QLFGPEDQQI VSGAPDNFVY ANDMSSSPRV YDIDKEVMQE SPDIVKDTSK  480
LVPVKSFGFA SDSMQTCYPT DENPTARIKK EDAGALCYEP PRFPSLDIPF FSCDLVQSGA  540
DMQQEFSPFG IRQFMMSSMN CLTPFRLWNS PSRDDSPDAL LKSAAKTFTG TPSILKKRRR  600
SLLSPLSNKR ISKKLETDMT ATLTKTFPSF EGIFNGNETS EAVLLSPTAL QNRNSSVSVD  660
DGKENYGPAF KGERVEEKMK SAILDKMKSE NDTVGCNSQN EIKKRPLDID AKMKIVVGAA  720
TVAEIVHQPS GVLVEHDIND RLLYSPDQAG FKSDIVLDSS ARTPKKLDNN SSEKAPNQSI  780
PLKLSSENPC SNVDSPCVRA KEHDRLSVAV TCVQSVCSSA PGENSGDQTR NDGPFETSNI  840
FGSTPFRKSL ESPSAWKSPW LFNTFLSSPR FATEITIEDF GYFISPGDRS YDAIGLMKQV  900
SEQTAATYAN AQEILGNETP KALKKDATGN KDGNHENNDP RKQAGNNSQL AINSLMERRV  960
LDFSECGTPG KGDNSKSSSA LSFSGPTSYL LKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-96	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW03047