PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02960

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 361aa MW: 39958 Da PI: 8.3652

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02960	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.7	1.1e-40	70	147	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls+++eyh+rh+vCe+hsk+pvvlv g++qrfCqqCsrfh+l efD+ krsCr+rL++hn+rrrk+q+ OIW02960 70 CCLVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDDVKRSCRKRLDGHNRRRRKPQP 147 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDWDWKEFTW YPSGLEVDAA SVGLRLGEAS DLMENPELGT PKEFKDLKTV LSTPGSSKRS 60 RSSNGSQNLC CLVDGCNSDL SDCREYHKRH RVCEKHSKTP VVLVGGKQQR FCQQCSRFHS 120 LGEFDDVKRS CRKRLDGHNR RRRKPQPPSL FMAAEEFLYN YKGPRILQFD SSQTYANPIM 180 RNVWPATAKT GAESGYDHHR LLYRIDKHKQ EKEVLLWQEN APKASIGNEA MLGTPICQPT 240 SGAIAASASG KGSRKLSSDS KLGSFDSSCA LYLLSTLQTQ SSKLSLVQSG TTCPIQSPTG 300 SVNFDAVDEY SCSGRKIDKP NGAVFVLDSN ATNLHCNGML QMGPDGLVKN GDSLTLPSFW 360 E

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDWDWKEFTW YPSGLEVDAA SVGLRLGEAS DLMENPELGT PKEFKDLKTV LSTPGSSKRS  60
RSSNGSQNLC CLVDGCNSDL SDCREYHKRH RVCEKHSKTP VVLVGGKQQR FCQQCSRFHS  120
LGEFDDVKRS CRKRLDGHNR RRRKPQPPSL FMAAEEFLYN YKGPRILQFD SSQTYANPIM  180
RNVWPATAKT GAESGYDHHR LLYRIDKHKQ EKEVLLWQEN APKASIGNEA MLGTPICQPT  240
SGAIAASASG KGSRKLSSDS KLGSFDSSCA LYLLSTLQTQ SSKLSLVQSG TTCPIQSPTG  300
SVNFDAVDEY SCSGRKIDKP NGAVFVLDSN ATNLHCNGML QMGPDGLVKN GDSLTLPSFW  360
E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	145	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	7e-44	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW02960