PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02878 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 109aa MW: 12656.2 Da PI: 5.0385 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 42.4 | 2e-13 | 1 | 57 | 45 | 101 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +l+++p+ r++a+++l+ eA++r++dP yG++g+i++l q++++ ++ela++++++ OIW02878 1 MLQQIPPYARKQAVDTLYLEAKCRIEDPTYGCAGIIFRLYQHIHEIEVELAKIQTQI 57 7999************************************************99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MLQQIPPYAR KQAVDTLYLE AKCRIEDPTY GCAGIIFRLY QHIHEIEVEL AKIQTQIAFH 60 NLQNPHVEVE SNFNAFSTIE AESNLNILPP QSSMGQFQYD HSNQSPWFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 3e-17 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW02878 |