PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 176aa MW: 19924.7 Da PI: 7.389 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.7 | 4.7e-39 | 11 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+l+r+C++ C++apyf +++ kkfa vhk+FGasnv+k+l ++pee+red+++sl+yeAear++dPvyG++g i lq+++++l+++la +k++ OIW02730 11 SCAACKFLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLKDPVYGVIGAIALLQRKMMELQHDLAIAKDR 110 6*********************************************************************************************999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MRGYEPRSTS SCAACKFLKR RCTPTCIFAP YFRSDECKKF AKVHKVFGAS NVSKILIEVP 60 EEQREDTVNS LAYEAEARLK DPVYGVIGAI ALLQRKMMEL QHDLAIAKDR LARYAAAATT 120 TAPDFYNNHV SLPPFPEFYT CTDFNDSFCH SSSSPTPSFS RHEITVDDFV QIPYIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11090.1 | 3e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW02730 |