PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02455 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | C3H | ||||||||
Protein Properties | Length: 1983aa MW: 219626 Da PI: 7.2459 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.8 | 6.6e-07 | 1859 | 1879 | 6 | 26 |
-SGGGGTS--TTTTT-SS-SS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHg 26 C++f +tGtC++G +Ck +H+ OIW02455 1859 CPTFEATGTCSHGTKCKLHHP 1879 *****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1983 aa Download sequence |
MDQHHYLRTK YAPTSSHHHN PNHLPPPPTL PPPPPPPPSH PYPSSYRATP PPPYHNNTYP 60 PQFAPNYPIQ QNRPISNNHH HPHSCPNSHS FSDNNDLPRR ALPDLDQSSW NPNPRVTSEN 120 RHPRNYSPVY FDMELHHRPV DRLPPPPPPP LYQPIDNLQF DHDDGSSRLR MERMDVYELN 180 PRERVRQREE SVWGWGGDGN YHRTDFGPNY DSPSQQGVRD IGLKPEGCVH VYDVEGKVEL 240 SRGGSGIRDE GHGESKRWVN ERNGPRVLRE SLLHECPSFE FGKNEIGATG KNGNDFRIVC 300 GKRDYYDNEL GRYNSRGNSG DCAHEFTHTP LEKQIQKKSA LLRLQTVKPN HRNHENEKFC 360 NTGYAAENKS NFFRGKEQHG YIGHGHGVKA EERKESPVEL DISFESNSLV AKAIVAPSSS 420 AVVCDTNMTT VSYTDMSSTE RRKKVSVSET DCSGLPLFKQ STGSVSLDSS PCKANATSSS 480 AKDLSLQKNV SDTCSPPCTS FSDMSHCKNE ATLSNGTTNL CSEKSSSIAV QKKKLVQRVV 540 KKVVKNRNST VSHSPSINTH HGTVQTDSLT TKLPSYPALD KIETSLKEKS TTGDKVSTTD 600 SLHSLPNEGN VLPEDMKKGL SLLSFEPHSR SHDYKTGEDS DIGKLARFEG GRNISNSPSR 660 VSASNDDKHN DFDDLVANNS VHELNGSTSE INGMVYDNKQ LCQNEVSPSL INYSNIGCSQ 720 NSYLVDLGDE INCSLVCSAD NIVNTDLIKT RESENDRVYH FNSNDLTGSE VNHTENLTGS 780 GENFTVSESG NDGIAGKALR ITQNTNLERN QDTDVPISEV IAISSSVNNR IQEDPNCIQH 840 TSVLKQGSAN ESANSEDNIT THCCDTGKLV PPSDATISLE NCDTEETLSN FNISVGFDTY 900 KIKEREVKSH LNILSSKIEG ISPDPVNPVS YASDVGIATN VLKLPSLSQD FDQSVQSLDF 960 NSKSSADEVT TLHGKIEVSE TEIYVENNGN DVANKVSRVS KREKVTARHP TFSNAVVVTT 1020 SCAVDLTSFS DNQAHKKGGT LSSMSTLSIS QSIPYSEGTA KLPDNILVGG SFESMSADRG 1080 FMSSEHSEIQ HADIASYSLC ENVPIPHLQF AMLQGEKKEN SIQAVPVSRT QTDTLVMGNS 1140 KGEKTDLQVV EESYQYRDLV QISPIADMES NDLNTKDDLL PQQNLMPCHN DGDGVNASIL 1200 DVELIEDVPD ALSNMCSKGM ASEVPAGKIL NYITSSQDYS EVKSHGLSSG GVIPKTFQGH 1260 SFTFSKTKTS ASSYYISKPR TCLRTLNTSH TSLPGIKPLV ATVPPTRLIL ERKGNTQNTS 1320 YIRKGNSLVR KPSLVSASPQ ISSAEQSPSF SSDELPINTR SESRVDLTEP ILKIGITNAP 1380 QQRQRTPPAP IDINSKENMS PPLVEPPSSV CYDSPNYFEN AMKHYETPDD QTDPSNNEEN 1440 EVEANDENIS SLKPKRIVYI KPKTNQLVAT SNYCNVSVST DNNTQIAFSD GYYKRSKNQL 1500 VRTTFESHIN QTVAMPNSTV NSNGQGVRKV LSSKRFSKRR SHKVAGTSCK PLRASLVWTL 1560 KGKNSSKNVC DSWYYQKVLP HLFPWKRTPY LRGFVNNYAS SSNHSSLSAI SKKLLLFRKR 1620 DTVYTRSTHG FSLWKSKVLG VGRSSLKWSK STEKHSKLAN EEATLAVAAV ERKKREQENA 1680 ACIGSRAKRE RIFRIGSVRY RMDPSRRTLK RISDDEPMSS ASVPSGLTAK RAYIPRRLVI 1740 GNDEYIQIGN GNQLIRDPKK RTRKLANEKD GGKCPYIHDP SKIAVCTKFL NGLCSTPNCT 1800 LTHKVIPERM PDCSYFLQGL CTNRDCPCRH VNVNPKASIC EGFLKGYCAD GNEKHSCVCP 1860 TFEATGTCSH GTKCKLHHPV RQSKGKKRKR SEDQESRGRY FGSSPVHVSE PGMMVAPRQC 1920 HRHVDVELPD YIGLDVDVDK EVAESVDQSF EQAMLCDSDS LDLELDNFDE LIEPVLIMKS 1980 SQS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1538 | 1542 | KRRSH |
2 | 1886 | 1891 | KKRKRS |
Link Out ? help Back to Top | |
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Ensembl | OIW02455 |