PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW02352
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 222aa    MW: 24310.6 Da    PI: 8.0628
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW02352genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260881.3e-2741081100
    DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
               +C++C++lr++C++dC+++p++     p++q++++ +++k++G++ +l+l++a+p   r+++++sl+yeA+ r+ +P  G++g+++++++  +q++++++l
  OIW02352   4 SCNGCRILRKGCSDDCTIRPCLewinsPESQANATLFLAKFYGRAGLLNLINAAPLPLRPAVFKSLMYEACGRIVNPAFGSLGLFWTGEWAQCQAAVDAVL 104
               6***********************************************************************************************99988 PP

    DUF260  97 lkee 100
                ++e
  OIW02352 105 NGSE 108
               7765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MRLSCNGCRI LRKGCSDDCT IRPCLEWINS PESQANATLF LAKFYGRAGL LNLINAAPLP  60
LRPAVFKSLM YEACGRIVNP AFGSLGLFWT GEWAQCQAAV DAVLNGSEIS AVDLSDWQVT  120
PGSKHVFPAH DIRHVSRDSH VDQLRGGKPR FKRTGNVIKP KARVGSFDSA RLWKPASASS  180
HGLRNKEGWE TESDQTVEAS LMSQDEPSRT AEANVDLELT LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.18e-59LBD family protein