PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02233

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 415aa MW: 46828.8 Da PI: 5.213

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02233	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	210	261	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ OIW02233 210 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 261 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MPPSFSTLDY SLDNHNHNHL YPQHLMKFQI GESSGGNDNV IVDYMPQQPP PPPQISPSGF 60 YGAASFDKLS FADVMQFADF GPKLALNQAK TCEETGIDPV YFLKFPVLND KMEDKNLMVI 120 NTEAGDGEAQ NDDEKFNMVS VEGNARAGVS DEKWGIIRDE ETRVSDDHNS VQIRYLGHEE 180 LQNNNSTVQE NKNKRKRPRT VKTSEEVESQ RMTHIAVERN RRKQMNEHLR VLRSLMPGSY 240 VQRGDQASII GGAIEFVREL EQLLQCLESQ KRRRILGEDQ SRQVGDPVLA IQQPIQPPFC 300 PPLPNDHLKL VELETGLHEE TAKSKSCLAD VEVKLLGFDA MIKILSRRRP GQLIKTIAAL 360 EDLQLIILHT NITTIEQTVL YSFNVEVASD SRFSAEDIAS SVQQIFSFIH ANTSM

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MPPSFSTLDY SLDNHNHNHL YPQHLMKFQI GESSGGNDNV IVDYMPQQPP PPPQISPSGF  60
YGAASFDKLS FADVMQFADF GPKLALNQAK TCEETGIDPV YFLKFPVLND KMEDKNLMVI  120
NTEAGDGEAQ NDDEKFNMVS VEGNARAGVS DEKWGIIRDE ETRVSDDHNS VQIRYLGHEE  180
LQNNNSTVQE NKNKRKRPRT VKTSEEVESQ RMTHIAVERN RRKQMNEHLR VLRSLMPGSY  240
VQRGDQASII GGAIEFVREL EQLLQCLESQ KRRRILGEDQ SRQVGDPVLA IQQPIQPPFC  300
PPLPNDHLKL VELETGLHEE TAKSKSCLAD VEVKLLGFDA MIKILSRRRP GQLIKTIAAL  360
EDLQLIILHT NITTIEQTVL YSFNVEVASD SRFSAEDIAS SVQQIFSFIH ANTSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	222	RMTHIAVERNRR
2	271	275	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-140	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW02233