PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02198 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 161aa MW: 17966.5 Da PI: 9.0666 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 139.8 | 3e-43 | 9 | 154 | 1 | 162 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 +d+ s se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l l+++ + ++ +d+ +l + + s ++k+ +as+s ++ OIW02198 9 MDLISPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSF--LSTRPPYSPQTQTIDH--------TLSL--QGFYS-DTKKGHASSSSPT--- 93 578899*************************************9755..3344333343333222........2222..22322.3344444444444... PP YABBY 102 senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 ++++ +p++ p v++PPek+ r Psaynrf+k+eiqrika+nP+i hreafsaaakn OIW02198 94 -TSNESVSPKAAPfVVKPPEKKHRLPSAYNRFMKDEIQRIKAANPEIPHREAFSAAAKNVNF 154 .3455566776666********************************************9754 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MNHEEKVTMD LISPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PYSPQTQTID HTLSLQGFYS DTKKGHASSS SPTTSNESVS PKAAPFVVKP PEKKHRLPSA 120 YNRFMKDEIQ RIKAANPEIP HREAFSAAAK NVNFLHPQFS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 7e-60 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW02198 |