PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW02147 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 285aa MW: 32301.2 Da PI: 7.1498 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 64.2 | 1.4e-20 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 + en+ rq t++kR+ngi+KKA+ELS+LCd+++ +++fs+tgk OIW02147 10 KLENTNGRQATYAKRKNGIIKKASELSILCDIDIILLMFSPTGK 53 6799**************************************97 PP | |||||||
2 | K-box | 16.3 | 4e-07 | 74 | 113 | 49 | 88 |
K-box 49 keLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 + L+q+e+ L++sl++iR+ K+++ ++q+ lq +++ + OIW02147 74 EKLEQMENSLKESLNQIRTCKENIQKQQLASLQCNNNQFN 113 67****************************9998877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRVKLKIKK LENTNGRQAT YAKRKNGIIK KASELSILCD IDIILLMFSP TGKPSLCRGR 60 RSHWTDFGKI SDAEKLEQME NSLKESLNQI RTCKENIQKQ QLASLQCNNN QFNEMRIPFI 120 MNADQHLQPL SWIANSDSQN MVLQEDSRFL QHRDVEGSTS SSFGTYASYL GSSSKTDISN 180 SGQENGVLSD LSSNAPVRLQ LNGQFPCQPY NFNVLNDIKF QLEAEMNPHE NHVDYHVNGR 240 FEAPRPGYDS NQYNWTSTSG PCAVTMLDEY LISQTSFPQV HFGFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03060.1 | 6e-44 | M-type_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW02147 |