PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02039

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 344aa MW: 37567.4 Da PI: 9.6732

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02039	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.3	1.7e-13	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky OIW02039 71 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 115 789***************77.*****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVSVNPNPSQ GFYFFDPSSM ALPGVNPLPP PQPPAPTAAD SSTSAASSST VIVIEDLSKK 60 IRKPYTITKS RESWTEQEHD KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ 120 KNGTSEHVPP PRPKRKAAHP YPQKAPKTTP TASQVTGPLQ SSNAFIEPAY IYSSDSSSVL 180 GTPVINVPLS SWNRNAIPPV SVPQVTKDDI GFTGAGQTVR PNCCYSSSNE STPASQPSSQ 240 GIDQGDQGRP LKVTPDFSQV YRFIGSVFDP DSANHLQRLK QMDPINVETV LLLMRNLSIN 300 LMSPEFEDHK RLLSSYDADS GKKKLGNLSS KSLPDKSKGA ILSA

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVSVNPNPSQ GFYFFDPSSM ALPGVNPLPP PQPPAPTAAD SSTSAASSST VIVIEDLSKK  60
IRKPYTITKS RESWTEQEHD KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ  120
KNGTSEHVPP PRPKRKAAHP YPQKAPKTTP TASQVTGPLQ SSNAFIEPAY IYSSDSSSVL  180
GTPVINVPLS SWNRNAIPPV SVPQVTKDDI GFTGAGQTVR PNCCYSSSNE STPASQPSSQ  240
GIDQGDQGRP LKVTPDFSQV YRFIGSVFDP DSANHLQRLK QMDPINVETV LLLMRNLSIN  300
LMSPEFEDHK RLLSSYDADS GKKKLGNLSS KSLPDKSKGA ILSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	310	325	KRLLSSYDADSGKKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52660.1	2e-96	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIW02039