PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW01882 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | TCP | ||||||||
Protein Properties | Length: 256aa MW: 27346.4 Da PI: 9.2322 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 128.1 | 8.9e-40 | 32 | 133 | 2 | 104 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksqk 102 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++ +s++ +++s+ +s ++q+ OIW01882 32 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-SVSVSVRGGGNSNSLSSPSSSTSASQQH 131 78*******************************************************************777.4444444444444444444444455555 PP TCP 103 sa 104 ++ OIW01882 132 KT 133 44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MSNSDGTTNA VINDTIIDSP QPHPPHRDGA LAVKKPPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA SFSSVSVSVR GGGNSNSLSS 120 PSSSTSASQQ HKTFLAPTPF ILGKKIRTDE EDPTKDNNGV SVGSLVGPNM PAGLWAFPAR 180 PEFGQVWSFA AATPELMSQQ HSSFLIQHQQ QHQQQQLAMG EASAARLGNY LPGHLNLLAS 240 LSGGHNNSGM RDDESN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 5e-64 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW01882 |