PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01609

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB_related

Protein Properties

Length: 453aa MW: 51008.9 Da PI: 6.0159

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01609	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	339	386	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E ++lvd++ ++G g+W+ I r + Rt+ +++++w+++l OIW01609 339 WTLPEVKKLVDGISEYGIGRWTNIKRFFFsssSYRTPTDIRDKWRNLL 386 **************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MYGKVQVDES YVPVLKDDEM EDEHLLEEHR NGHISMDGSL DSHTTLNGMD DLGLEVLVLS 60 MFGTSSYYWD DVEARVLDGI LDDVEINDLD GIDVFSGACD EYFLDCDFVN DPEVLGYGLS 120 KGSLLQNSSS ESHSSGFSGS SIVGGVSEST KVPSAQPECK NYSPDGTTTS ESSDALRNNP 180 SQPSNGDCMY IISLDMKHLH ELNNDHPLAG GILSFENEKD AAEEPQPTAL REKRFRKPTK 240 RYIEESSNLR SKEKVPTAAT KNKNLSLSSC DELNVRPKAL GKIPDEKYRN ENSDVTLSAL 300 KVCRGHPKKK KLENDKEPLS SESEDEPKRK DRRKSQKMWT LPEVKKLVDG ISEYGIGRWT 360 NIKRFFFSSS SYRTPTDIRD KWRNLLRASS AQKSYDKEAE QNDELALRPL PLDVVHRVRE 420 LAKIHPYPRA RGSKKSCVRS SLGKRNFQRK RCS

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MYGKVQVDES YVPVLKDDEM EDEHLLEEHR NGHISMDGSL DSHTTLNGMD DLGLEVLVLS  60
MFGTSSYYWD DVEARVLDGI LDDVEINDLD GIDVFSGACD EYFLDCDFVN DPEVLGYGLS  120
KGSLLQNSSS ESHSSGFSGS SIVGGVSEST KVPSAQPECK NYSPDGTTTS ESSDALRNNP  180
SQPSNGDCMY IISLDMKHLH ELNNDHPLAG GILSFENEKD AAEEPQPTAL REKRFRKPTK  240
RYIEESSNLR SKEKVPTAAT KNKNLSLSSC DELNVRPKAL GKIPDEKYRN ENSDVTLSAL  300
KVCRGHPKKK KLENDKEPLS SESEDEPKRK DRRKSQKMWT LPEVKKLVDG ISEYGIGRWT  360
NIKRFFFSSS SYRTPTDIRD KWRNLLRASS AQKSYDKEAE QNDELALRPL PLDVVHRVRE  420
LAKIHPYPRA RGSKKSCVRS SLGKRNFQRK RCS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	334	KKKKLENDKEPLSSESEDEPKRKDRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	5e-22	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIW01609