PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW01518 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 201aa MW: 22340.5 Da PI: 6.3316 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 139.6 | 1.1e-43 | 48 | 147 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C++ Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++reda+ss+vyeA+ar+rdP+yG++g i++lq+q+++l+a+la++++e OIW01518 48 PCAACKILRRRCVERCVLAPYFPPNDPIKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPIYGCAGAISQLQNQINELQAQLAKAQAE 147 7***********************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MFSNSHPLSN SSPLCSQSPQ PFSSRSQSPP SATPPPQSPP PPPVVVSPCA ACKILRRRCV 60 ERCVLAPYFP PNDPIKFTIA HRVFGASNII KFLQELPESQ REDAVSSMVY EANARIRDPI 120 YGCAGAISQL QNQINELQAQ LAKAQAEIIN MHFQHSNLVA LICMEMSESQ EKQLFQSQQH 180 IDMSCFLDDN SLGCSWEPLW T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 2e-65 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW01518 |