PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW01470 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 22917.7 Da PI: 7.8705 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.9e-17 | 112 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdps k r++lg+f+ + +Aaka++ a+ k++g OIW01470 112 RYRGVRRRP-WGKYAAEIRDPSR--KGCRVWLGTFDREIDAAKAYDCAAFKMRG 162 8********.**********854..34**********99*************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MTTQETCSNL DLIRQHLLGD ISDLHPVKLE DPLQDFNFSS YISDHNSFYS FIEEYDLVAD 60 MEFIDQSSSS KNVLKSIGTN PRKDTEKCGS HEPVVLSGKK DEKQERGDEG KRYRGVRRRP 120 WGKYAAEIRD PSRKGCRVWL GTFDREIDAA KAYDCAAFKM RGQKAILNFP LEAGESDPKP 180 NNCGRKRRRM GGLEMPRYTD |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 185 | 189 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07580.1 | 7e-40 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW01470 |