PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01244

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 559aa MW: 61866.1 Da PI: 7.7623

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01244	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	56	102	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia++++ R++ qc +rwqk+l OIW01244 56 KGGWTAEEDETLRNAVAAFKGKSWKKIAEYFP-DRSEVQCLHRWQKVL 102 688***************************.**********986 PP
2	Myb_DNA-binding	63.1	5.4e-20	108	154	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++v++v ++G+ W++Ia+ ++ gR +kqc++rw+++l OIW01244 108 KGPWTQEEDDKIVELVSEHGPTKWSLIAKSLP-GRIGKQCRERWHNHL 154 79****************************.***********97 PP
3	Myb_DNA-binding	51.6	2.1e-16	160	203	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE+ l +a+ +G++ W+ Ia+ ++ gRt++ +k++w++ OIW01244 160 KDAWTMEEEMTLMNAHSIHGNK-WAEIAKVLP-GRTDNAIKNHWNS 203 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MKSEERCQEN KQSTAASCSS ISEGCGSAIR KSTTIRSPAL TSPSHRRTTG PIRRAKGGWT 60 AEEDETLRNA VAAFKGKSWK KIAEYFPDRS EVQCLHRWQK VLNPELVKGP WTQEEDDKIV 120 ELVSEHGPTK WSLIAKSLPG RIGKQCRERW HNHLNPDIKK DAWTMEEEMT LMNAHSIHGN 180 KWAEIAKVLP GRTDNAIKNH WNSSLKKKLD FYTATGRLPP ISKNNTQIAG KDSIRQSVNK 240 TQLVSSNKEL NAAVETSSET TAISKLDDSS KNSSGTVRVG YSSSVPVNES ADSDSVECNP 300 GSSNVDLSCS YSEPVSRANC GITSGPKIEN YSLNRKATIE HCINNGEMSS SRLIITSFPQ 360 ESPSCGSLCY EPPYLDGSVP LDSLDLNYTC RHNESVLSPI GFRTPTSMKS RECRESPESI 420 LRKAASTYPN TPSILRRRKT EVQTHTSPTK ILKLDNGLHA SNEPARDKDD SGSEVGICSE 480 SPAIVVNESD GLSNTAFNAS PPYQLRFKRK AVIKCVEKQL EFAFDEEKND DNDIAMEKSV 540 KRNNVISEDC LHETNLVVT

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MKSEERCQEN KQSTAASCSS ISEGCGSAIR KSTTIRSPAL TSPSHRRTTG PIRRAKGGWT  60
AEEDETLRNA VAAFKGKSWK KIAEYFPDRS EVQCLHRWQK VLNPELVKGP WTQEEDDKIV  120
ELVSEHGPTK WSLIAKSLPG RIGKQCRERW HNHLNPDIKK DAWTMEEEMT LMNAHSIHGN  180
KWAEIAKVLP GRTDNAIKNH WNSSLKKKLD FYTATGRLPP ISKNNTQIAG KDSIRQSVNK  240
TQLVSSNKEL NAAVETSSET TAISKLDDSS KNSSGTVRVG YSSSVPVNES ADSDSVECNP  300
GSSNVDLSCS YSEPVSRANC GITSGPKIEN YSLNRKATIE HCINNGEMSS SRLIITSFPQ  360
ESPSCGSLCY EPPYLDGSVP LDSLDLNYTC RHNESVLSPI GFRTPTSMKS RECRESPESI  420
LRKAASTYPN TPSILRRRKT EVQTHTSPTK ILKLDNGLHA SNEPARDKDD SGSEVGICSE  480
SPAIVVNESD GLSNTAFNAS PPYQLRFKRK AVIKCVEKQL EFAFDEEKND DNDIAMEKSV  540
KRNNVISEDC LHETNLVVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-151	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW01244