PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW00806 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 23092.2 Da PI: 7.7679 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.3 | 2.9e-39 | 16 | 116 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +kll ++p +r da+ +l+yeA arardPvyG+vg+i++lqqq+ +l+ael +++++ OIW00806 16 PCGACKFLRRKCEKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLMRIPVPKRLDAVVTLCYEALARARDPVYGCVGHIFALQQQVVNLQAELTYVQAR 116 7***********************9989********************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MDCRNKNVGG SEKGGPCGAC KFLRRKCEKG CIFAPYFDSD QGTAHFAAVH KVFGASNASK 60 LLMRIPVPKR LDAVVTLCYE ALARARDPVY GCVGHIFALQ QQVVNLQAEL TYVQARLATM 120 HHLAISPHPQ TSSPTSFPSS SDHLASNADL HCSSNISMHF DHPQPQSTSL ELSNNVNPFC 180 QQLEDGELQA VALEFVSRYL PGVRFQPPNS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00210.1 | 1e-64 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW00806 |