PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00650

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 481aa MW: 52764.3 Da PI: 7.5164

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00650	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123	3.3e-38	71	229	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec......eae 76 g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk++eWL++ a ai el+++ s a++ + OIW00650 71 SGGKDRHSKVMTSRGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAVEWLIKSASDAISELPSLnntfpdtpkepsvgieqgfdS---AEAEidgntnYHT 168 689**************************************************************999999888888885541...3222233322333 PP TCP 77 sssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrik 133 ++++ + n+s++ + +++a+s+ s++s+ s l+l++ r kar+rarert++++ + OIW00650 169 QQQQHNTNQSQNLSLSKSACSSTSETSKGSGLSLSRpdvrVNRIKARERARERTAKEKDSE 229 3333333445556666666777777777777777776445677*********999887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEEDEIQTPA SKFPRIGNGR NDFSNKIGTR GGLGSGEQQN PIYDEVDGGG STNRFHSWHH 60 SSRIIRVSRA SGGKDRHSKV MTSRGLRDRR VRLSVATAIQ FYDLQDRLGF DQPSKAVEWL 120 IKSASDAISE LPSLNNTFPD TPKEPSVGIE QGFDSAEAEI DGNTNYHTQQ QQHNTNQSQN 180 LSLSKSACSS TSETSKGSGL SLSRPDVRVN RIKARERARE RTAKEKDSET LNNIAHHVNI 240 NNNPISQTSF TELLTGGTSN AVPTTTSPNN NDSMRNQNQW CSTAPMDYFT SGLLGPSSSS 300 SRTNTSGFSQ IQLGHSLPET MQVSLSPFSL SGTDHNQNHS SDQQLHHHFS FTHDHLMPAM 360 VTSSSSSSHQ HHQPNHDYNL NFTISPGLAG YNRGTLQSNS PSHMLPQHNH MQRFSSSTID 420 GSTVPFFIGA ASAAASSASN MENNHHQQQQ LHFSPIFDGR GLQLCYGDGT RHSDQKGKGK 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEEDEIQTPA SKFPRIGNGR NDFSNKIGTR GGLGSGEQQN PIYDEVDGGG STNRFHSWHH  60
SSRIIRVSRA SGGKDRHSKV MTSRGLRDRR VRLSVATAIQ FYDLQDRLGF DQPSKAVEWL  120
IKSASDAISE LPSLNNTFPD TPKEPSVGIE QGFDSAEAEI DGNTNYHTQQ QQHNTNQSQN  180
LSLSKSACSS TSETSKGSGL SLSRPDVRVN RIKARERARE RTAKEKDSET LNNIAHHVNI  240
NNNPISQTSF TELLTGGTSN AVPTTTSPNN NDSMRNQNQW CSTAPMDYFT SGLLGPSSSS  300
SRTNTSGFSQ IQLGHSLPET MQVSLSPFSL SGTDHNQNHS SDQQLHHHFS FTHDHLMPAM  360
VTSSSSSSHQ HHQPNHDYNL NFTISPGLAG YNRGTLQSNS PSHMLPQHNH MQRFSSSTID  420
GSTVPFFIGA ASAAASSASN MENNHHQQQQ LHFSPIFDGR GLQLCYGDGT RHSDQKGKGK  480
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-43	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW00650