PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW00324 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 460aa MW: 53265.6 Da PI: 6.6733 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 1e-18 | 191 | 237 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed ll+++v+q+G + W+ Ia+ ++ gR +kqc++rw+++l OIW00324 191 KGQWTEDEDRLLIQLVEQYGVRKWAHIAQNLP-GRIGKQCRERWHNHL 237 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 58 | 2.2e-18 | 244 | 285 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ OIW00324 244 EVWTDEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 285 68*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 460 aa Download sequence |
MDLETNQNEN YASQPMHLQE NYLKQPSKKE ELPFETPSSQ EFMQDFQHID QFHHTNASLP 60 NQVFGIQTQN FDPFVNITCG CSQSDFDGYE CKPFVENDGS GSHAHVVDIF QYEGYSLNFP 120 RRNQMDIMPS NQSYLPFNPL ETKSMNFAAP DEVSCISPAN YYRRVGLNRN NKTSPIIRRS 180 CKVKKKSNIV KGQWTEDEDR LLIQLVEQYG VRKWAHIAQN LPGRIGKQCR ERWHNHLRPD 240 IKKEVWTDEE DKILIQAHAE IGNKWAEIAK RLPGRTENSI KNHWNATKRR QYSKRKCRSK 300 YPRGTILQDY IKSLNLDKNP PIDYRKRSSA NAMRIKASTS KAATSTTQPH STNQVSSNDR 360 LVPNYEFNEV SDFCFDDNMF QEGCSIDSLL DDMPCAPTMD EKDFDGKMQS ASKMKGKQVV 420 NVEEGHHFET EMPQEMEGNV VKKELDLVEM MSQVNQTHDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-99 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW00324 |