PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00308

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 386aa MW: 43184.8 Da PI: 6.1289

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00308	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l ++++++G g+W+++++ g+ R++k+c++rw +yl OIW00308 14 KGLWSPDEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.2	1.1e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ OIW00308 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGRHSSSVKQ KMRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLLRQG 120 MDPTTHKPLN EANVKEEKTS TESPPQIQIP FSIGPSTTST LLASSQGSPF LISNSNYYDD 180 GRLAETSREI FMSNQTLDPL SNYDNFQMSV AQNSGYGLHV SSSYQTSIKT LFDQNQFATN 240 STYCFSSMPS LTNSDHVSLT EFSSDNNSGS KISSLFMNDN SNHNNQVKES SSNNSSNMSI 300 FTAAAGGGCH QMMENAAGFS WDAENKLDPL FQFNAIKSEE FKTCNSWEEE QHHLQTTHGS 360 IDLSSYPLTS LSEDLAGASF DAFQHI

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGRHSSSVKQ KMRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLLRQG  120
MDPTTHKPLN EANVKEEKTS TESPPQIQIP FSIGPSTTST LLASSQGSPF LISNSNYYDD  180
GRLAETSREI FMSNQTLDPL SNYDNFQMSV AQNSGYGLHV SSSYQTSIKT LFDQNQFATN  240
STYCFSSMPS LTNSDHVSLT EFSSDNNSGS KISSLFMNDN SNHNNQVKES SSNNSSNMSI  300
FTAAAGGGCH QMMENAAGFS WDAENKLDPL FQFNAIKSEE FKTCNSWEEE QHHLQTTHGS  360
IDLSSYPLTS LSEDLAGASF DAFQHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-80	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW00308