PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW00236 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ARF | ||||||||
Protein Properties | Length: 821aa MW: 92118 Da PI: 8.1639 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.5 | 4.4e-17 | 140 | 222 | 1 | 78 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 f k+lt sd++++g l++ k++a+e+ + ++++ +l+ +d++g++W++k+iyr+ ++r++l++GW+ Fv +++ + g+ OIW00236 140 FYKTLTASDTSTHGGLSVLKRHADEClppldmtKDVPTQ--ELVTKDLHGNEWRFKHIYRGEPRRHLLQSGWSVFVTSKRCENGE 222 789***************************987666555..8**************************************99987 PP | |||||||
2 | Auxin_resp | 107.2 | 1.8e-35 | 255 | 337 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+haast+++F+v+Y+Pr+s+ F+v++ +++++lk++++ G Rfkm+fe+e+++e+r++Gt+vg++d+dp +Wp+SkWr+Lk OIW00236 255 AWHAASTRTMFTVYYKPRTSPVGFIVPYYQYMESLKINYTNGIRFKMRFEGEEAREQRFTGTIVGIEDVDPKKWPDSKWRNLK 337 89******************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 821 aa Download sequence |
MTSYSKIAMN KRGQFINNNT RDRGEGQNEA EQALFRELWE ACAGPLVTAP REGELVFYFP 60 QGHIEQVEAS TNQVPNENMP VYDLRSKILC RVMNVVLKVE PYTDEVFAQV TLVPEPIQDE 120 NKVEKEPPLA PLPRIHVRSF YKTLTASDTS THGGLSVLKR HADECLPPLD MTKDVPTQEL 180 VTKDLHGNEW RFKHIYRGEP RRHLLQSGWS VFVTSKRCEN GELRVGVRRA MRQQVNVPLS 240 IISSHSMYLG VLATAWHAAS TRTMFTVYYK PRTSPVGFIV PYYQYMESLK INYTNGIRFK 300 MRFEGEEARE QRFTGTIVGI EDVDPKKWPD SKWRNLKVRW DETSNIPLPD RVSPWMIEPY 360 LAPPSLNLIS IPRPKRHRPN VVPSSPESSV LTREGTSSKV TTNPFPASGY SRVLQGSEFS 420 TLRGNWVGSN TSDNGGKSIM WPPAVYDKKN DVVSTSRRFG PESWMSTRRH ETYSDLLSGF 480 GANRDLSSHI PSLLDQSGDV ANAAKKHLLD REGEHNVMGS PCSVVPSSLS LDLVNSNTKG 540 LAHGGDLPYQ VRGNFRYSAF SEYPVYGGQK VEHPHGNLMM LPPPTTQYVS PHSREMSSKQ 600 ISANTGEVVK PKEGNCKLFG FSLPSSPIVS GPSMSQRNVV NELVGPMHLP SHQNHTSEND 660 QKSEHSRGSK PTDGEFVADD YEKQSKDVQP KLHNSFARSY TKVHKKGIAL GRSVDLTKFG 720 GYDELIAELD QLFEFGGELT SPKKDWLIVY TDNEGDMMLV GDDPWLEFCA MVCKMYIYPK 780 EEIQKMNPGA LGSKNKENHS GSKGADAPAV KCQPPHPGYN T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW00236 |