PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW00235
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 340aa    MW: 39147.8 Da    PI: 9.0026
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW00235genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.51.1e-17140223179
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 
               f k+lt sd++++g l++ k++a+e+       + ++++  +l+ +d++g++W++k+iyr+ ++r++l++GW+ Fv +++ + g+ 
  OIW00235 140 FYKTLTASDTSTHGGLSVLKRHADEClppldmtKDVPTQ--ELVTKDLHGNEWRFKHIYRGEPRRHLLQSGWSVFVTSKRCENGEL 223
               789***************************987666555..8**************************************999975 PP
2Auxin_resp109.14.7e-36255337183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+haast+++F+v+Y+Pr+s+  F+v++ +++++lk++++ G Rfkm+fe+e+++e+r++Gt+vg++d+dp +Wp+SkWr+Lk
    OIW00235 255 AWHAASTRTMFTVYYKPRTSPVGFIVPYYQYMESLKINYTNGIRFKMRFEGEEAREQRFTGTIVGIEDVDPKKWPDSKWRNLK 337
                 89******************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MTSYSKIAMN KRGQFINNNT RDRGEGQNEA EQALFRELWE ACAGPLVTAP REGELVFYFP  60
QGHIEQVEAS TNQVPNENMP VYDLRSKILC RVMNVVLKVE PYTDEVFAQV TLVPEPIQDE  120
NKVEKEPPLA PLPRIHVRSF YKTLTASDTS THGGLSVLKR HADECLPPLD MTKDVPTQEL  180
VTKDLHGNEW RFKHIYRGEP RRHLLQSGWS VFVTSKRCEN GELRVGVRRA MRQQVNVPLS  240
IISSHSMYLG VLATAWHAAS TRTMFTVYYK PRTSPVGFIV PYYQYMESLK INYTNGIRFK  300
MRFEGEEARE QRFTGTIVGI EDVDPKKWPD SKWRNLKVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-174ARF family protein