PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW00134 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 685aa MW: 75945.4 Da PI: 6.0777 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.8 | 1e-27 | 232 | 285 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+q+ G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl OIW00134 232 KPRVVWSVELHQQFVAAVDQI-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 285 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.2 | 3.2e-12 | 234 | 284 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av q G + +k+I + m+ g+t++++ s++qky+ OIW00134 234 RVVWSVELHQQFVAAVDQIGIDkaVPKKILELMNvPGLTRENVASHLQKYR 284 678***********************************************7 PP | |||||||
3 | Response_reg | 44.6 | 7.8e-16 | 28 | 102 | 1 | 75 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii 75 vl+vdD+p+ +++l+++l+ y +v+ + +e al ll+e++ +D++l D+ mp+mdG++ll++i e +lp+i OIW00134 28 VLVVDDDPTCLMILERMLRTCLY-QVTKCNRAEIALMLLRENKngFDIVLSDVHMPDMDGFKLLEHIGLEM-DLPVI 102 89*********************.***************999999**********************5533.57766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 685 aa Download sequence |
MYLINGQGSM SNSGGDGVSD QFPAGLRVLV VDDDPTCLMI LERMLRTCLY QVTKCNRAEI 60 ALMLLRENKN GFDIVLSDVH MPDMDGFKLL EHIGLEMDLP VISKYLIEKF RSLQCSVEIL 120 TIYIKKCVVM SADDSKNVVM KGVTHGACDY LIKPVRIDSL KNIWQHVVRK KKNEWKDTEQ 180 SGSAEEGDRQ LRASDDADYS SSANEGRQRN SKKRRDEDED ADERDDTSAL KKPRVVWSVE 240 LHQQFVAAVD QIGIDKAVPK KILELMNVPG LTRENVASHL QKYRLYLRRL SGVSQHPNNS 300 FLSQQDATFG SVSSINDLQT LAAAGQLPAQ SLATLQAAGL GRSTAKAGIP MPLMDQRNLF 360 SFENPRLRFG EGQQQHLNSS KSINLLHEMC TNLEPKQLAN LHQSTQSIGN LNIRVNASTT 420 QRNPLLIHMT QSQPKGQMLN ENTGLAPRLS SSFGQPNRNG FFNGPLDRNG IATSNIASAQ 480 NSSMLSFPRN QTPEMSISSF PLGSTPGISS ITTKGSFQEE VTSGIKEDGG FVPSYDIFNE 540 LHHHKSRDWE ITSPGLAYAA SQPANPLQGN INVSSSILVE RGFYPTQQTG LNRDSPLMSK 600 ALFSLGEGLE RGNLQNADQH LNTLVDNSVR VKVERIPDES SQSNLFPEHY GQEDLLSALL 660 KQQEGVEPVE NEYDFDGYSL DNVHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 0.0 | ARR-B family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW00134 |