PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00118

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 298aa MW: 33733.8 Da PI: 5.1339

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00118	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	112.6	2.6e-35	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCaaCk++rrkC+++C lapyfpa+qpk f nvhklFG+sn++k+lk l+++++++am+s++ +++ r + Pv+G+ + i +lq q+ +++el+++ ++ OIW00118 10 ACAACKYQRRKCTSECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPDQKKIAMDSIIIQSNYRSKYPVHGCWEEICRLQYQILWAEEELQAVYQQ 109 7*********************************************************************************************999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MTLKGGTTQA CAACKYQRRK CTSECLLAPY FPADQPKVFL NVHKLFGVSN IVKILKILEP 60 DQKKIAMDSI IIQSNYRSKY PVHGCWEEIC RLQYQILWAE EELQAVYQQL ETCRQQQQAS 120 MPGYMNVTSQ LDLGMATPDT NALPLFDHSP QPQTYDDTVA AVAALPAVQQ HSYSNSNSVD 180 YSSVDYNSSL YLESKDDTTN PLWVQHHPYA NNNNNSIVMQ SQLVASQQLA IQHGTVEDYE 240 QMHPLFDAID DRQSYIYSKE AYESSSEESL KDTRKCTDHF AKNELKNAAA FFSLTGVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	3e-44	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW00118