PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW00088
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 551aa    MW: 61450.6 Da    PI: 6.1634
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW00088genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.34.2e-1191805511374
      GRAS   1 lvelLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
               l+++L+ cA+avs++d  +a   + + l +++s +gdp+qRl ay++e+L+arl +s+s +yk+l++++ s     e +++++++++++P+ kf+++  N 
  OIW00088 180 LRDVLMLCAQAVSDDDIPRAVGWMDNvLGKMVSVSGDPIQRLGAYLLEGLRARLESSGSVIYKSLKCEQPS---GNELMTYMHILYKICPYWKFAYISSNA 277
               5789**************9998886527889***************************************9...9999999******************** PP

      GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                I ea+++e+ +HiiDf+i qG+QW  L++ La Rp+gpps+RiTg++++es+  +   le +g+rL+++ ++ gvpfef+  va +   +e e+L v+pg
  OIW00088 278 VIAEAMANESIIHIIDFQIAQGTQWQLLMEDLARRPGGPPSIRITGIDDSESFyaRGGGLEIVGKRLSNISRSYGVPFEFHS-VAMSACVVEKEDLGVRPG 377
               *************************************************999999999************************.68889999********** PP

      GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac 300
               Ea+aV + + lh+++de vs+e++rd+vL+lvkslsPkvv +veqe+++n+ +F++rf+e+++yysa+f+s+++  pre+++ri+ E+ +++r+iv+++ c
  OIW00088 378 EAVAVIFPYVLHHMPDEGVSMENHRDRVLRLVKSLSPKVVSLVEQESNTNTCPFFHRFVETVDYYSAMFESIDVACPREDKKRISTEQNCVARDIVSMIGC 478
               ***************************************************************************************************** PP

      GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               eg er+erhe ++kW++r+++aGFk+ pls++++  ++ +l++++ + yr+++++g+l+lgW +r++++ SaWr
  OIW00088 479 EGIERVERHEVFGKWKSRFNMAGFKQCPLSSSVMGAVRDMLKEFSAN-YRLQNRDGTLYLGWINRAMTTSSAWR 551
               *********************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MQMAQKHSPS GAIHLYQQPV QSVYQILQSN NPWHDSNSQG ATICFETIKD QYFTLESSSP  60
ATNALIGCDS PSYASISSNN RIPLSPQQGS QSCHSDHHHS SDITYGSPIS GYSSSSADDD  120
ATDLKHRLRE LEIQLLGPDQ SDIVYSYGCC FVNNGLHGAS PPISKYDWDQ IAVMIPKLNL  180
RDVLMLCAQA VSDDDIPRAV GWMDNVLGKM VSVSGDPIQR LGAYLLEGLR ARLESSGSVI  240
YKSLKCEQPS GNELMTYMHI LYKICPYWKF AYISSNAVIA EAMANESIIH IIDFQIAQGT  300
QWQLLMEDLA RRPGGPPSIR ITGIDDSESF YARGGGLEIV GKRLSNISRS YGVPFEFHSV  360
AMSACVVEKE DLGVRPGEAV AVIFPYVLHH MPDEGVSMEN HRDRVLRLVK SLSPKVVSLV  420
EQESNTNTCP FFHRFVETVD YYSAMFESID VACPREDKKR ISTEQNCVAR DIVSMIGCEG  480
IERVERHEVF GKWKSRFNMA GFKQCPLSSS VMGAVRDMLK EFSANYRLQN RDGTLYLGWI  540
NRAMTTSSAW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein