PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW00034 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 36030.5 Da PI: 5.6107 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.5e-18 | 54 | 102 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr ++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g OIW00034 54 FVGVRKRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDKAALSMKG 102 89******.**********965...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 324 aa Download sequence |
MSSTSRTKSD AYASSLKGPH EPNQAQNCLS LVQRNTCSSG ERRGRKKQAE PGRFVGVRKR 60 PWGRYAAEIR DPTTKERHWL GTFDTAQEAA LAYDKAALSM KGNQARTNFV YSHNINFHTL 120 VTSQIDVQIQ PLLPTSQVLG TNTQTNQKTM SQLNIENMCV VETANSSSTY QDDNLFFSND 180 CSSGYLECIV PDNCFRPGSG SSTNSSYSRK SISCAPSNDD QKVNSLNNTN YIESTLLLDQ 240 MASSFSPQEG LWNNQQYSWD WNSSELSAIF NNNNNSNALR VEHDGCMDHN SESSPSYGLM 300 NEAASSTICF PPFEDVDLGY HQLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18560.1 | 7e-50 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW00034 |