PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99949

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 380aa MW: 43407.9 Da PI: 6.8842

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99949	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.9	6.1e-41	115	257	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssasnsssg..... 88 kkdrhski T++g+RdRRvRls+++a+rfF Lqd+LGfdk+skt++WLl+qak +i +l++ s+ss sec + OIV99949 115 SKKDRHSKINTAKGMRDRRVRLSILVAKRFFGLQDMLGFDKASKTVDWLLNQAKIEIEQLAREknihhhddvkSASSTSEC--------------Tdvvss 201 69***********************************************************544444444333333444..............022223 PP TCP 89 ..........kaaksaa.kskksqks.aasalnlakesrakarararertrekmrik 133 + + + k ++++ ++++ + kesr+kar+rarert+ek +++ OIV99949 202 ldevvvignrE-QVKGViKVRRAKLCrKSEFKYVCKESREKARERARERTKEKIKTR 257 34445555532.333322333333320223366778***************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYSSNRPIKG NDLIPYPIQF CSSRPFAIES NPTSTQETTT SAFPSPPLSF FQFPYDPFED 60 HEILLEQQHH HELLNHQQSL ADDESINVNM ENNSIIPDHK ARQGTDPQIQ IRRSSKKDRH 120 SKINTAKGMR DRRVRLSILV AKRFFGLQDM LGFDKASKTV DWLLNQAKIE IEQLAREKNI 180 HHHDDVKSAS STSECTDVVS SLDEVVVIGN REQVKGVIKV RRAKLCRKSE FKYVCKESRE 240 KARERARERT KEKIKTRDLM LAEADKSKEC DEASNNKLNG LGSWNPFETV EECAYTQIQS 300 ANPSLDVLTH GIKELSSQAK GHLGSVEDIE HEDSLVIMSK WNPTMIFNYS LSNSGILQEH 360 QFPEFQSIMG KPWELGGLQQ

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYSSNRPIKG NDLIPYPIQF CSSRPFAIES NPTSTQETTT SAFPSPPLSF FQFPYDPFED  60
HEILLEQQHH HELLNHQQSL ADDESINVNM ENNSIIPDHK ARQGTDPQIQ IRRSSKKDRH  120
SKINTAKGMR DRRVRLSILV AKRFFGLQDM LGFDKASKTV DWLLNQAKIE IEQLAREKNI  180
HHHDDVKSAS STSECTDVVS SLDEVVVIGN REQVKGVIKV RRAKLCRKSE FKYVCKESRE  240
KARERARERT KEKIKTRDLM LAEADKSKEC DEASNNKLNG LGSWNPFETV EECAYTQIQS  300
ANPSLDVLTH GIKELSSQAK GHLGSVEDIE HEDSLVIMSK WNPTMIFNYS LSNSGILQEH  360
QFPEFQSIMG KPWELGGLQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-25	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV99949