PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV99907 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 177aa MW: 20053.8 Da PI: 8.1619 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 202.3 | 1.9e-62 | 6 | 160 | 3 | 169 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 v+ +seq+Cy+ C+fCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ ++ ++ ++ +++ ++ ++s+ ++ + OIV99907 6 VDVASEQLCYIPCKFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV---------QAPNHCNNPEYRIDTSGSTSK--CNNRIPMRA 95 6789**********************************************9999999884.........333333333333333333322..222223333 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 ++ ++++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs aaknWahfP+ihfg OIV99907 96 PTT-HATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSNAAKNWAHFPHIHFG 160 322.23334468*****************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSSCSVDVAS EQLCYIPCKF CNIVLAVSVP CSSLFDIVTV RCGHCTNLWS VNMAAAFQSL 60 SWQDVQAPNH CNNPEYRIDT SGSTSKCNNR IPMRAPTTHA TEERVVNRPP EKRQRVPSAY 120 NQFIKEEIQR IKANNPDISH REAFSNAAKN WAHFPHIHFG MMLESSNNQV KMENIRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-88 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV99907 |