PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV99687 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 30167.7 Da PI: 6.0282 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.7 | 2.4e-19 | 7 | 54 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 +ppGfrFhPtdeelv++yL++kv++++++l ++ik+vd+yk+ePwdL++ OIV99687 7 VPPGFRFHPTDEELVDYYLRRKVTSRRIDL-DIIKDVDLYKIEPWDLQE 54 69****************************.99**************83 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MNTLSHVPPG FRFHPTDEEL VDYYLRRKVT SRRIDLDIIK DVDLYKIEPW DLQEGWVVCR 60 VFKKRVTTTS MRKVSEHDSP CWYDDQVCFM QDLDSPRQIT SKPNNLLYQI PYNNNNNNNN 120 PCKKELDLPY HLSRDQFLQL PLLESPKLVQ SSSTISASNP MATLLMQEEQ QVQQQNFHAM 180 YGNNNINVEQ GGVDQVTDWR VLDKFVASQL SHDNASSSRD NNNNFHGTDI NSNVHLEKQE 240 MVPQNNASTS NSTCPIHLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-28 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV99687 |