PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIV99673 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 261aa MW: 29914.3 Da PI: 7.5487 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.8 | 1.2e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRr g+lKKA+EL +LCdae+aviifs+tgkl+e+ss OIV99673 9 KKIENANSRQVTFSKRRSGLLKKAHELAILCDAEIAVIIFSNTGKLFEFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 49.3 | 2.1e-17 | 100 | 179 | 17 | 87 |
K-box 17 lqqelakLkkeienLq.........reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 ++ ++ Lk+eie+L+ R+llG+dL+ L ++eL++Le+qL+++l +R++K+ell++qie+++ + +e+ OIV99673 100 ESKMVEILKDEIEKLEteqfinvstGDFRRLLGKDLTGLGIEELKHLEHQLNEGLLAVRERKEELLMQQIEQSRIQVEEI 179 3344445555555555333322324567********************************************99887765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MGRGKIEIKK IENANSRQVT FSKRRSGLLK KAHELAILCD AEIAVIIFSN TGKLFEFSSS 60 VMKRTLSRYN ECNISSDATV VEYRKEIVMS NNKFSLQKEE SKMVEILKDE IEKLETEQFI 120 NVSTGDFRRL LGKDLTGLGI EELKHLEHQL NEGLLAVRER KEELLMQQIE QSRIQVEEIR 180 CLFPLTERVV PSFLPYHRME RKNALVDNGV KRPNLASNCA NEKGDSDITL HLGLPNDVHQ 240 KRKTPEKETI SNDSETQMAL V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13790.1 | 7e-67 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIV99673 |