PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99418

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 521aa MW: 58153.8 Da PI: 6.7717

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99418	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.8	1.8e-10	166	222	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+ ++ a++k++g OIV99418 166 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARSYDLAALKYWG 222 57*****************5444.2455536655.779999************98 PP
2	AP2	47.2	5.6e-15	255	304	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OIV99418 255 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 304 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MNSNNWLSFP HSPPHSTLPT QDLQATQYHQ FSLGLVNENM ENPFQTHDWN LINNHSSNEV 60 PKVADFLGVS KSESQSDLGA MNEIQPNESE YLLPNNSLAP MQNTVVTTSN NYEYTENAKN 120 NLQSLTLSMG SGKDSTCEIS TDNNSTQIVE AAPSRRTSDT FGQKTSIYRG VTRHRWTGRY 180 EAHLWDNSCR REGQSRKGRQ GGYDKEEKAA RSYDLAALKY WGTSTTTNFP HMTRQEFVAS 240 IRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTEEE AAEAYDIAAI 300 KFRGLNAVTN FDMSRYDVKA ILESNTLPIG GGAAKRLKEA QALESSRKRD QEMIALGSSF 360 QFGTSSSSRL QPYPLMQHFE QPQPLLTLQN HDISHFSQDP STLHQSYLQT QLQLHQQSSS 420 SYLHQPAQNS QFYNSYLQNH HPSLLPGMMN MGSSSSSILE NDNHNVRGYT GNVSAVGPGE 480 ELGMVKVDYD MSSGGYSGWS AEGAESMQAS NGGSVFTMWN E

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MNSNNWLSFP HSPPHSTLPT QDLQATQYHQ FSLGLVNENM ENPFQTHDWN LINNHSSNEV  60
PKVADFLGVS KSESQSDLGA MNEIQPNESE YLLPNNSLAP MQNTVVTTSN NYEYTENAKN  120
NLQSLTLSMG SGKDSTCEIS TDNNSTQIVE AAPSRRTSDT FGQKTSIYRG VTRHRWTGRY  180
EAHLWDNSCR REGQSRKGRQ GGYDKEEKAA RSYDLAALKY WGTSTTTNFP HMTRQEFVAS  240
IRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTEEE AAEAYDIAAI  300
KFRGLNAVTN FDMSRYDVKA ILESNTLPIG GGAAKRLKEA QALESSRKRD QEMIALGSSF  360
QFGTSSSSRL QPYPLMQHFE QPQPLLTLQN HDISHFSQDP STLHQSYLQT QLQLHQQSSS  420
SYLHQPAQNS QFYNSYLQNH HPSLLPGMMN MGSSSSSILE NDNHNVRGYT GNVSAVGPGE  480
ELGMVKVDYD MSSGGYSGWS AEGAESMQAS NGGSVFTMWN E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV99418