PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV99413 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 201aa MW: 22774.5 Da PI: 7.6208 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.8 | 9.2e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCda++ ++ifs +gklye + OIV99413 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDADIGLVIFSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 67.9 | 3.5e-23 | 91 | 174 | 17 | 100 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e + Lk+eie+Lq+ + l G +++++++ eLq Le++Le+ + +iRs K++++l++i+ l+ ke l+ +nk+L++k++e OIV99413 91 AKEETDVLKQEIETLQKGIGYLFGGGIGTMTMDELQVLEKNLENWIYHIRSMKMNIMLQEIQALRDKEGTLEAANKYLHNKIME 174 5799*****************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MARGRVQLKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD ADIGLVIFSA HGKLYELATK 60 GTMQGLIERY MKFTRGSQPE GATEAHPPLD AKEETDVLKQ EIETLQKGIG YLFGGGIGTM 120 TMDELQVLEK NLENWIYHIR SMKMNIMLQE IQALRDKEGT LEAANKYLHN KIMENTAIAD 180 FAPFTTDTMY PLIIQDGVFQ L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 8e-73 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV99413 |