PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV99347
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 204aa    MW: 22395.5 Da    PI: 5.6462
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV99347genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.21.4e-43371361100
    DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
               +CaaCk+lrr+Ca++Cvlapyfp +qp+kf ++h++FGasn++kll++lpe++r da+ss+vyeA ar+rdPvyG++gvi +lq+q+++l+a+la++++e
  OIV99347  37 PCAACKILRRRCAEKCVLAPYFPPTQPAKFTIAHRVFGASNIIKLLQELPESQRADAVSSMVYEASARIRDPVYGCAGVICNLQNQVNELQAQLAKAQAE 136
               7**********************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MKSCDTSTPV SSTLLSQSPT NSSSSFPITP PQVVMIPCAA CKILRRRCAE KCVLAPYFPP  60
TQPAKFTIAH RVFGASNIIK LLQELPESQR ADAVSSMVYE ASARIRDPVY GCAGVICNLQ  120
NQVNELQAQL AKAQAEVVNM QVQQANLMAL ICMDVAQSPH ELSPQQSMDN FISSPPHSSD  180
YQSSANFYEE NSSLNLLWDQ PLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-66LBD family protein