PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV99340
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 782aa    MW: 87418.5 Da    PI: 7.7512
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV99340genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.45.7e-23164265199
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f+k+lt sd++++g +++p++ aee+       ++ +  s++l+ +d++  +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + +++el++
  OIV99340 164 FCKTLTASDTSTHGGFSVPRRAAEECfppldykQLRP--SQELVAKDLHDAEWKFRHIYRGQPRRHLLTTGWSIFVSRKNLVSGDAVLFL--RGENGELRL 260
               99****************************9866554..559************************************************..4499999** PP

               EEE-S CS
        B3  95 kvfrk 99 
               +++r+
  OIV99340 261 GIRRA 265
               **996 PP
2Auxin_resp114.78.1e-38290372182
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 
                 +a+a+stks+F+v+Y+Pras+s+Fvv+++k+ k++k++v+ G+Rfkm+fe++ s err+ sG+v+g+sdldp+rWp+SkWr+L
    OIV99340 290 VANAISTKSMFHVFYSPRASHSDFVVPYRKYIKSIKNPVTNGTRFKMRFEMDVSTERRCnSGMVIGTSDLDPYRWPKSKWRCL 372
                 689*******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 782 aa     Download sequence    
MEIDLNHAVT EVEKNAFCNG ECDEKGACVC YLSSSNSTCS SSTSSSLHVS SSYLELWHAC  60
AGPLTSLPKK GNVVVYFPQG HLEQVSSFTP IEIPTCNLQP QIFCRVVNVQ LLANKENDEV  120
YTQVTLLPQA ELEGMHLDGK ELEELGADEE KIGGSPAKPT PHMFCKTLTA SDTSTHGGFS  180
VPRRAAEECF PPLDYKQLRP SQELVAKDLH DAEWKFRHIY RGQPRRHLLT TGWSIFVSRK  240
NLVSGDAVLF LRGENGELRL GIRRAVRPRN GLPESIVGNQ NCYSNFLSYV ANAISTKSMF  300
HVFYSPRASH SDFVVPYRKY IKSIKNPVTN GTRFKMRFEM DVSTERRCNS GMVIGTSDLD  360
PYRWPKSKWR CLMVRWDENI ESNHQDRLSP WEIVPSASLP PMNIHSSARL KKLRTCQQAA  420
SPSHLITGVA AGGRGLNDFE ESMRSTKVLQ GQEKSGFVSH YYGSDTVRKG NSAELMSVHP  480
FSYAAYIETN RFRRVLQGQE IRPSKSVTGN VDFNLGAWGN PNISYTNMHQ VTKPNFQSLG  540
PQVLQSAYFP RGDINKDGRA SMFCSKPKNL QRENSPYNTT STQARIMRNE NGQTDLSNEH  600
KLQDNISTAA GLSAPNMRFP TEHNVKGKVN ACKLFGFPLS GETTTTQNLQ NSARSCTKVH  660
KQGSLVGRAI DLSRLSCYND LLSELEKLFG MEGLLRDPDK GWRILYTDSD NDIMVVGDDP  720
WHEFCNVVSK IHIYTQEEVD NMTIGMTSDD THSCLEQAPV IMEASKSSSV GQPDYSPTVV  780
RV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein