PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99329

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 759aa MW: 86394.6 Da PI: 7.4955

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99329	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	58.4	9.6e-19	682	715	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C +t+Tp+WR+gp g+ktLCnaCG++yr+ + OIV99329 682 CTHCEVTETPQWREGPMGPKTLCNACGVRYRSGR 715 *******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MDHNTLNFST LLILVGLLVS ASFAKNDFGH CERVVKVWAD SSLDEEIRED KHTLRDLLFF 60 LHVPRTGGRT YFHCFLKKLY PSYLECPRSY DKLRFDPSKP KCRLLVTHDD YSMTSKLPRQ 120 RTSVVTILRD PIDRVFSTYE FSIEVASRFL VHPNLTSATH MAKRLRSRTK GVSTLEIWPW 180 KYLVPWMRED LFSRTLNGQR DARYSRGLHT MDSNDSYDME DFAMPLIEYI KHPAAGDLVH 240 NGATFQVAGL TNNSYIAEAH KVRHCVQKYK ILGKYVLQVA KKRLDDMLYV GLTEEHKESA 300 TMFANVVGSQ VISQLNGPNA SLDIVDKTEQ GSSSDSDPDS SEHQNSTTDK GASEVTSSES 360 GEATELNMTV GELMNAYEGC ISNLRKSQSR RRIASLKKIS PVNFSREARL HVSEEVLQEI 420 RSLNDLDIEL YEYARTIFYK QHKTTLQTFT EERWDNDYGI TMWKDIADMK DCWFLDNNFN 480 CLSDGISDDV FEFFDFPIED VETDFVEEDW AAQFKHIEEP SLGVFSVPHS AALCDKTQNE 540 TPKVGIENTS TDSLEKTTGP TYGKTTPIQN VSFNRKDVHK FQTYSPVSVF ESSSSSSVEN 600 SNSDLPVIPL KRPRGKRQRL SSFNLLLSLP FISTSPTFET RTSGKLVTRV KKKQKKKDLL 660 LLPDHSEMKR SSSQESGVLG KCTHCEVTET PQWREGPMGP KTLCNACGVR YRSGRLFPEY 720 RPAASPTFVA SLHSNSHKKV IEMRHRAAKE TFRGSSVMS

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MDHNTLNFST LLILVGLLVS ASFAKNDFGH CERVVKVWAD SSLDEEIRED KHTLRDLLFF  60
LHVPRTGGRT YFHCFLKKLY PSYLECPRSY DKLRFDPSKP KCRLLVTHDD YSMTSKLPRQ  120
RTSVVTILRD PIDRVFSTYE FSIEVASRFL VHPNLTSATH MAKRLRSRTK GVSTLEIWPW  180
KYLVPWMRED LFSRTLNGQR DARYSRGLHT MDSNDSYDME DFAMPLIEYI KHPAAGDLVH  240
NGATFQVAGL TNNSYIAEAH KVRHCVQKYK ILGKYVLQVA KKRLDDMLYV GLTEEHKESA  300
TMFANVVGSQ VISQLNGPNA SLDIVDKTEQ GSSSDSDPDS SEHQNSTTDK GASEVTSSES  360
GEATELNMTV GELMNAYEGC ISNLRKSQSR RRIASLKKIS PVNFSREARL HVSEEVLQEI  420
RSLNDLDIEL YEYARTIFYK QHKTTLQTFT EERWDNDYGI TMWKDIADMK DCWFLDNNFN  480
CLSDGISDDV FEFFDFPIED VETDFVEEDW AAQFKHIEEP SLGVFSVPHS AALCDKTQNE  540
TPKVGIENTS TDSLEKTTGP TYGKTTPIQN VSFNRKDVHK FQTYSPVSVF ESSSSSSVEN  600
SNSDLPVIPL KRPRGKRQRL SSFNLLLSLP FISTSPTFET RTSGKLVTRV KKKQKKKDLL  660
LLPDHSEMKR SSSQESGVLG KCTHCEVTET PQWREGPMGP KTLCNACGVR YRSGRLFPEY  720
RPAASPTFVA SLHSNSHKKV IEMRHRAAKE TFRGSSVMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08000.2	3e-37	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV99329