PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV99248
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 384aa    MW: 43631.6 Da    PI: 7.9677
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV99248genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.34.3e-06126149426
               ---SGGGGTS..--TTTTT-SS-SS CS
   zf-CCCH   4 elCrffartG..tCkyGdrCkFaHg 26 
                 C+ ++r G   C++Gd+C F+Hg
  OIV99248 126 TVCPEYRR-GcgSCSHGDTCEFSHG 149
               67******.889************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MSIVCAEQHK FQSSHQLLSL KKSLRDIDIP PRKRLPRRAT ITHDGAADMF SDETLFQKYL  60
PHNNMNMVDE SDDDSDPYSS DHFRMYEFKV RKCSRSRSHD WTDCPFAHPG EKARRRDPRR  120
YYYSSTVCPE YRRGCGSCSH GDTCEFSHGV FECWLHPARY RTEACKDGKN CKRKVCFFAH  180
TPRQLRVLPI NSHPTSNEII NSCNNNNKGE FLNTSDIKHS CLFCHCNSCG STCSPTSTLF  240
GMSHFYSPPM SPSSSPANGV SSMSRFVGSE KNHHDSVGVI SYKDMLNELM CSLKGFSVAD  300
TNSNYNSHLS SSSSSKVHKK NLNWLDASFN CEDQQQRFVL SPSPTTESFS SNGRYSTSNF  360
YKNVAKVVDD VNDPDLGWVN ELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-58C3H family protein