PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99224

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 315aa MW: 35496 Da PI: 7.1374

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99224	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l++ ++ +G+g W+ ++ g+ R++k+c++rw +yl OIV99224 15 KGPWTPEEDVKLINHIQNHGPGKWRNLPKIAGLQRCGKSCRLRWANYL 62 79********************************************97 PP
2	Myb_DNA-binding	52.2	1.5e-16	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +G++ W++Ia +++ gRt++++k++w+++ OIV99224 68 RGRFSFEEEETIIQLHSVMGNK-WSAIATRLP-GRTDNEIKNYWNTH 112 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MVRVPCCEKN NGLKKGPWTP EEDVKLINHI QNHGPGKWRN LPKIAGLQRC GKSCRLRWAN 60 YLRPDIKRGR FSFEEEETII QLHSVMGNKW SAIATRLPGR TDNEIKNYWN THIKKRLLRS 120 GIDPVTHAPR LDLLNMSSIL RTMLGNSSLL NLQGLIGAQA LMNPELLNLV ATASLLASQN 180 NPQQLQYNGN CQTQNQEFSQ FQTPTQSNNV GGFMGNLRCS SSLQNSIPTY LDENIVLQQN 240 QVEELLGNDQ VLVHQSVNNA NKIIGYDSVL SSPNHLNNSS STYVSSSTNE EERDSYCSEL 300 FNFEIPENLD ISDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	6e-90	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV99224