PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99086

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 393aa MW: 44171.8 Da PI: 5.8568

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99086	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.1	1.9e-12	50	106	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s ykGV++++++gr++A+++d s+n+ ++ k ++ g ++ +e Aa+ ++ a++k++g OIV99086 50 SIYKGVTRHRWTGRFEAHLWDkSSWNNiQNkKGIQ-GAYDCEEAAARTYDLAALKYWG 106 57*****************777797779999.99******************98 PP
2	AP2	51.5	2.5e-16	149	200	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t+eeAa a++ a+ k +g OIV99086 149 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYKTEEEAAIAYDMAAIKHRG 200 89**99*******99644...4*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MKRSHASSCS SSSSVVFESP IEKRRPKHPR RNVKSKQTNK QNKTTVGRSS IYKGVTRHRW 60 TGRFEAHLWD KSSWNNIQNK KGIQGAYDCE EAAARTYDLA ALKYWGNDAT LNFPIETYSK 120 DLDEMKKVTK EEFLANLKRQ SSGFSRGVSK YRGVARHHHN GRWEARIGRV CGNKYLYLGT 180 YKTEEEAAIA YDMAAIKHRG LNAVTNFEIS NYSDKIKMKN YPSEEAETQT ETAPSSIDSE 240 EAEVEQKNTP PSLENLHKEP QEPQIQNTNF FISEESSAVI PVEHVFEQDM PWNFMDTSLS 300 QFQDIEMGLS KEENLSSMFN GGGFEDDIEF LFSTDPGGGE FNFNEVLDNI VECGDGGGGA 360 EAMVDKNKQK ILSSASSPSS SSTTTTVSCD YSL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MKRSHASSCS SSSSVVFESP IEKRRPKHPR RNVKSKQTNK QNKTTVGRSS IYKGVTRHRW  60
TGRFEAHLWD KSSWNNIQNK KGIQGAYDCE EAAARTYDLA ALKYWGNDAT LNFPIETYSK  120
DLDEMKKVTK EEFLANLKRQ SSGFSRGVSK YRGVARHHHN GRWEARIGRV CGNKYLYLGT  180
YKTEEEAAIA YDMAAIKHRG LNAVTNFEIS NYSDKIKMKN YPSEEAETQT ETAPSSIDSE  240
EAEVEQKNTP PSLENLHKEP QEPQIQNTNF FISEESSAVI PVEHVFEQDM PWNFMDTSLS  300
QFQDIEMGLS KEENLSSMFN GGGFEDDIEF LFSTDPGGGE FNFNEVLDNI VECGDGGGGA  360
EAMVDKNKQK ILSSASSPSS SSTTTTVSCD YSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-99	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIV99086