PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99079

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 513aa MW: 56416.5 Da PI: 5.9981

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99079	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.5e-18	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l OIV99079 39 KGPWTSVEDAILVDYVTRHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	48.6	1.8e-15	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l ++++++G++ W++ a +++ gRt++++k++w++ OIV99079 92 KGAFTAEEEQLVTELHAKMGNK-WARMAVHLP-GRTDNEIKNYWNT 135 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MGRMNTNEIE DEIPPNNLTE SQMNDEGDGG SASGVILKKG PWTSVEDAIL VDYVTRHGEG 60 NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTAEEE QLVTELHAKM GNKWARMAVH 120 LPGRTDNEIK NYWNTRIKRC QRAGLPLYPP EVCLKAFQES QQSQSTGGFN AGRKVHHNFL 180 HKNSYEIHDS IFDRLKDNQR ISPNVPELPN IYDYSNMLKS LDSSQYCSFA PSTSPIHKRL 240 RDSTMPFLGS SDMIRNVFNP FDHVQANFSD KIAQSFGMQS PLDHGPSSHS SICYSHSLSN 300 GNSSTSKPTY EAVKLELPSL QYPDIDLGSW GTSPPPPLLD SVDDFIQSPT PISAMESDSS 360 SPQNSGLLDA LLYQAKTMSS SKNHYSDKSS NSSTATPGHR ADSSMLNMCE TEWEDHTDPV 420 SPFGATSILN ECPAVANANS LDETPPDQTF NGNIVKLESA DQIGQDSGHV KNQTITTDAI 480 SILLGDDLAT GYNKHMNAGT SKSCQVWGFG SCP

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MGRMNTNEIE DEIPPNNLTE SQMNDEGDGG SASGVILKKG PWTSVEDAIL VDYVTRHGEG  60
NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTAEEE QLVTELHAKM GNKWARMAVH  120
LPGRTDNEIK NYWNTRIKRC QRAGLPLYPP EVCLKAFQES QQSQSTGGFN AGRKVHHNFL  180
HKNSYEIHDS IFDRLKDNQR ISPNVPELPN IYDYSNMLKS LDSSQYCSFA PSTSPIHKRL  240
RDSTMPFLGS SDMIRNVFNP FDHVQANFSD KIAQSFGMQS PLDHGPSSHS SICYSHSLSN  300
GNSSTSKPTY EAVKLELPSL QYPDIDLGSW GTSPPPPLLD SVDDFIQSPT PISAMESDSS  360
SPQNSGLLDA LLYQAKTMSS SKNHYSDKSS NSSTATPGHR ADSSMLNMCE TEWEDHTDPV  420
SPFGATSILN ECPAVANANS LDETPPDQTF NGNIVKLESA DQIGQDSGHV KNQTITTDAI  480
SILLGDDLAT GYNKHMNAGT SKSCQVWGFG SCP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-102	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV99079